MolNFT v2 · #210775 · protein

Crystal structure of the human PDI first domain with 9 mutations

8GDY: “Crystal structure of the human PDI first domain with 9 mutations”. X-ray diffraction at 2.05, 1 ligand (SCN). MolNFT v2 #210775 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 8GDY
Type: protein
Length: 238 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.05
Source: Homo sapiens
UniProt: P07237
Ligands: SCN

Structure

x-ray diffraction · resolution 2.05 · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	118	—	P07237
B	—	protein	120	—	P07237

Ligands and binding sites

SCN · Thiocyanate ion · ion · 2 copies · chains A, B
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P07237
Elsewhere: RCSB PDB 8GDY · PDBe 8GDY · UniProt P07237

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