MolNFT v2 · #207514 · protein
Structure of Helicobacter pylori EgtU bound to EGT
8DP7: “Structure of Helicobacter pylori EgtU bound to EGT”. X-ray diffraction at 3.35, 1 ligand (LW8). MolNFT v2 #207514 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 8DP7
- Type
- protein
- Length
- 1,325 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.35
- Source
- Helicobacter pylori (strain P12)
- UniProt
- B6JM49
- Ligands
- LW8
Structure
x-ray diffraction · resolution 3.35 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E | — | protein | 265 | — | B6JM49 |
Ligands and binding sites
- LW8 · trimethyl-[(2S)-1-oxidanyl-1-oxidanylidene-3-(2-sulfanylidene-1,3-dihydroimidazol-4-yl)propan-2-yl]azanium · ligand · 5 copies · chains A, B, C, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B6JM49
- Elsewhere: RCSB PDB 8DP7 · PDBe 8DP7 · UniProt B6JM49
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