MolNFT v2 · #204231 · protein
Crystal structure of D-amino acid aminotrensferase from Aminobacterium colombiense complexed with D-glutamate
8AYK: “Crystal structure of D-amino acid aminotrensferase from Aminobacterium colombiense complexed with D-glutamate”. X-ray diffraction at 1.9, 1 ligand (PMP). MolNFT v2 #204231 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 8AYK
- Type
- protein
- Length
- 553 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.9
- Source
- Aminobacterium colombiense
- UniProt
- D5EHC5
- Ligands
- PMP
Structure
x-ray diffraction · resolution 1.9 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 277 | — | D5EHC5 |
| B | — | protein | 276 | — | D5EHC5 |
Ligands and binding sites
- PMP · 4'-deoxy-4'-aminopyridoxal-5'-phosphate · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D5EHC5
- Elsewhere: RCSB PDB 8AYK · PDBe 8AYK · UniProt D5EHC5
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