MolNFT v2 · #201253 · RNA
Cryo-EM structure of Tetrahymena ribozyme conformation 2 undergoing the second-step self-splicing
7YGA: “Cryo-EM structure of Tetrahymena ribozyme conformation 2 undergoing the second-step self-splicing”. Electron microscopy at 2.35, 1 ligand (MG). MolNFT v2 #201253 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7YGA
- Type
- RNA
- Length
- 407 nucleotides
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.35
- Source
- Tetrahymena; SYNTHETIC CONSTRUCT
- Ligands
- MG
Structure
electron microscopy · resolution 2.35 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 8 | — | — |
| B | — | rna | 6 | — | — |
| N | — | rna | 393 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 8 copies · chains A, B, N
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7YGA · PDBe 7YGA
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.