MolNFT v2 · #195321 · protein
Structure of Paenibacillus polymyxa GS bound to Met-Sox-P-ADP (Transition state complex) to 1.98 Angstom
7TDP: “Structure of Paenibacillus polymyxa GS bound to Met-Sox-P-ADP (Transition state complex) to 1.98 Angstom”. X-ray diffraction at 1.98, 2 ligands (ADP, MG). MolNFT v2 #195321 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7TDP
- Type
- protein
- Length
- 1,320 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.98
- Source
- Paenibacillus polymyxa
- UniProt
- A0A0F0G8G2
- Ligands
- ADP, MG
Structure
x-ray diffraction · resolution 1.98 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 440 | — | A0A0F0G8G2 |
| C | — | protein | 441 | — | A0A0F0G8G2 |
| B | — | protein | 439 | — | A0A0F0G8G2 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 3 copies · chains A, C, B
- MG · Magnesium ion · metal · 9 copies · chains A, C, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7TDP · Structure of paenibacillus polymyxa gs bound to met-sox-P-ADP (transition state complex)… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0F0G8G2
- Elsewhere: RCSB PDB 7TDP · PDBe 7TDP · UniProt A0A0F0G8G2
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