MolNFT v2 · #193315 · protein
Crystal structure of affinity-enhancing and catalytically inactive ACE2 in complex with SARS-CoV-2 RBD
7RPV: “Crystal structure of affinity-enhancing and catalytically inactive ACE2 in complex with SARS-CoV-2 RBD”. X-ray diffraction at 3.54, 2 ligands (NAG, ZN). MolNFT v2 #193315 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7RPV
- Type
- protein
- Length
- 3,125 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.54
- Source
- Homo sapiens; Severe acute respiratory syndrome coronavirus 2
- UniProt
- Q9BYF1, P0DTC2
- Ligands
- NAG, ZN
Structure
x-ray diffraction · resolution 3.54 · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 597 | — | Q9BYF1 |
| E | — | protein | 187 | — | P0DTC2 |
| F | — | protein | 184 | — | P0DTC2 |
| C | — | protein | 595 | — | Q9BYF1 |
| G | — | protein | 184 | — | P0DTC2 |
| D | — | protein | 596 | — | Q9BYF1 |
| H | — | protein | 185 | — | P0DTC2 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 24 copies · chains A, H, B, G, C, D
- ZN · Zinc ion · metal · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7RPV · Crystal structure of affinity-enhancing and catalytically inactive ACE2 in complex with… · the same entry in another collection · chain B against B, TM-score 1.00
- Q9BYF1 · AlphaFold monomer V2.0 prediction for angiotensin-converting enzyme 2 (Q9BYF1) · a predicted model of the same protein · chain C against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9BYF1
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7RPV · PDBe 7RPV · UniProt Q9BYF1 · UniProt P0DTC2
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