MolNFT v2 · #191974 · protein
Endothiapepsin in complex with compound TL00150 at room-temperature (temperature ramping down structure 6)
7QME: “Endothiapepsin in complex with compound TL00150 at room-temperature (temperature ramping down structure 6)”. X-ray diffraction at 1.79, 1 ligand (U1H). MolNFT v2 #191974 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7QME
- Type
- protein
- Length
- 330 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.79
- Source
- Cryphonectria parasitica
- UniProt
- P11838
- Ligands
- U1H
Structure
x-ray diffraction · resolution 1.79 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 330 | — | P11838 |
Ligands and binding sites
- U1H · [4-(trifluoromethyl)phenyl]methanamine · ligand · 2 copies · chains A
- DMS · Dimethyl sulfoxide · additive · 3 copies · chains A
- PG5 · 1-methoxy-2-[2-(2-methoxy-ethoxy]-ethane · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7QME · Endothiapepsin in complex with compound TL00150 at room-temperature (temperature ramping… · the same entry in another collection · chain A against A, TM-score 1.00
- P11838 · AlphaFold monomer V2.0 prediction for endothiapepsin (P11838) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11838
- Elsewhere: RCSB PDB 7QME · PDBe 7QME · UniProt P11838
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