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MolNFT v2 · #191496 · RNA

Crystal structure of the methyltransferase-ribozyme 1, no Magnesium condition (with 1-methyl-adenosine)

7Q80: “Crystal structure of the methyltransferase-ribozyme 1, no Magnesium condition (with 1-methyl-adenosine)”. X-ray diffraction at 3.14, 2 ligands (GUN, NA). MolNFT v2 #191496 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
7Q80
Type
RNA
Length
124 nucleotides
Chains
6
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
3.14
Ligands
GUN, NA

Structure

x-ray diffraction · resolution 3.14 · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, D—rna14——
B, E—rna24——
C, F—rna24——

Ligands and binding sites

  • GUN · Guanine · ligand · 2 copies · chains A, B, C, D, E, F
  • NA · Sodium ion · metal · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7Q80 · Crystal structure of the methyltransferase-ribozyme 1, no magnesium condition (with… · the same entry in another collection · chain C against C, TM-score 1.00

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