MolNFT v2 · #191346 · protein + DNA
Structure of CDX1 bound to hydroxymethylated DNA
7Q3O: “Structure of CDX1 bound to hydroxymethylated DNA”. X-ray diffraction at 2.78. MolNFT v2 #191346 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7Q3O
- Type
- protein + DNA
- Length
- 389 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.78
- Source
- Homo sapiens; SYNTHETIC CONSTRUCT
- UniProt
- P47902
Structure
x-ray diffraction · resolution 2.78 · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, D, F | — | dna | 18 | — | — |
| H, I, J, L | — | dna | 18 | — | — |
| K, G | — | protein | 61 | — | P47902 |
| C | — | protein | 63 | — | P47902 |
| E | — | protein | 60 | — | P47902 |
Compared structures
- P47902 · AlphaFold monomer V2.0 prediction for homeobox protein cdx-1 (P47902) · a predicted model of the same protein · chain E against A, TM-score 0.91
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P47902
- Elsewhere: RCSB PDB 7Q3O · PDBe 7Q3O · UniProt P47902
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