MolNFT v2 · #190374 · protein
Structure of LPMO domain of colonization factor GbpA from Vibrio cholerae in the presence of potassium
7PB6: “Structure of LPMO domain of colonization factor GbpA from Vibrio cholerae in the presence of potassium”. X-ray diffraction at 1.5, 3 ligands (K, CU, SCN). MolNFT v2 #190374 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7PB6
- Type
- protein
- Length
- 360 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.5
- Source
- Vibrio cholerae O1
- UniProt
- Q9KLD5
- Ligands
- K, CU, SCN
Structure
x-ray diffraction · resolution 1.5 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 180 | — | Q9KLD5 |
Ligands and binding sites
- K · Potassium ion · metal · 7 copies · chains A, B
- CU · Copper (II) ion · metal · 2 copies · chains A, B
- SCN · Thiocyanate ion · ion · 5 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PB6 · Structure of lpmo domain of colonization factor gbpa from vibrio cholerae in the presence… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9KLD5 · AlphaFold monomer V2.0 prediction for glcnac-binding protein a (Q9KLD5) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KLD5
- Elsewhere: RCSB PDB 7PB6 · PDBe 7PB6 · UniProt Q9KLD5
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