MolNFT v2 · #187001 · protein
Crystal structure of Candidatus Liberibacter solanacearum dihydrodipicolinate synthase with pyruvate and succinic semi-aldehyde bound in active site
7MJF: “Crystal structure of Candidatus Liberibacter solanacearum dihydrodipicolinate synthase with pyruvate and…”. X-ray diffraction at 2.2, 2 ligands (E8U, ZGM). MolNFT v2 #187001 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 7MJF
- Type
- protein
- Length
- 1,776 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.2
- Source
- Candidatus Liberibacter solanacearum
- UniProt
- A0A0F4VK59
- Ligands
- E8U, ZGM
Structure
x-ray diffraction · resolution 2.2 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F | — | protein | 296 | — | A0A0F4VK59 |
Ligands and binding sites
- E8U · (4R)-4-oxidanyl-2-oxidanylidene-heptanedioic acid · ligand · 6 copies · chains A, B, C, D, E, F
- ZGM · (4S)-4-hydroxy-2-oxoheptanedioic acid · ligand · 6 copies · chains A, B, C, D, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7MJF · Crystal structure of candidatus liberibacter solanacearum dihydrodipicolinate synthase… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0F4VK59
- Elsewhere: RCSB PDB 7MJF · PDBe 7MJF · UniProt A0A0F4VK59
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