MolNFT v2 · #186623 · protein
Antibodies to the SARS-CoV-2 receptor-binding domain that maximize breadth and resistance to viral escape
7M7W: “Antibodies to the SARS-CoV-2 receptor-binding domain that maximize breadth and resistance to viral escape”. X-ray diffraction at 2.65, 1 ligand (NAG). MolNFT v2 #186623 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7M7W
- Type
- protein
- Length
- 2,136 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.65
- Source
- Homo sapiens; Severe acute respiratory syndrome coronavirus 2
- UniProt
- P0DTC2
- Ligands
- NAG
Structure
x-ray diffraction · resolution 2.65 · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, L | — | protein | 216 | — | — |
| A | — | protein | 221 | — | — |
| D, F | — | protein | 215 | — | — |
| C | — | protein | 217 | — | — |
| H | — | protein | 219 | — | — |
| E | — | protein | 222 | — | — |
| S | — | protein | 197 | — | P0DTC2 |
| R | — | protein | 198 | — | P0DTC2 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains S, R
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7M7W · Antibodies to the SARS-cov-2 receptor-binding domain that maximize breadth and resistance… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 7M7W · PDBe 7M7W · UniProt P0DTC2
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