GL1X · GenesisL1 explorer

MolNFT v2 · #184319 · protein

Biotin Carboxylase domain of Thermophilic 2-Oxoglutarate Carboxylase bound to Bicarbonate

7KBL: “Biotin Carboxylase domain of Thermophilic 2-Oxoglutarate Carboxylase bound to Bicarbonate”. X-ray diffraction at 2.3, 1 ligand (BCT). MolNFT v2 #184319 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7KBL
Type
protein
Length
894 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.3
Source
Hydrogenobacter thermophilus
UniProt
D3DJ42
Ligands
BCT

Structure

x-ray diffraction · resolution 2.3 · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein443—D3DJ42
B—protein451—D3DJ42

Ligands and binding sites

  • BCT · Bicarbonate ion · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7KBL · Biotin carboxylase domain of thermophilic 2-oxoglutarate carboxylase bound to bicarbonate · the same entry in another collection · chain A against A, TM-score 1.00
  • D3DJ42 · AlphaFold monomer V2.0 prediction for 2-oxoglutarate carboxylase small subunit (D3DJ42) · a predicted model of the same protein · chain A against A, TM-score 0.97

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