MolNFT v2 · #184239 · protein
DENV2 NS1 in complex with neutralizing 2B7 single chain Fab variable region (scFv)
7K93: “DENV2 NS1 in complex with neutralizing 2B7 single chain Fab variable region (scFv)”. X-ray diffraction at 2.89, 1 ligand (NAG). MolNFT v2 #184239 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7K93
- Type
- protein
- Length
- 2,244 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.89
- Source
- Dengue virus 2; Mus musculus
- UniProt
- D0EPS0
- Ligands
- NAG
Structure
x-ray diffraction · resolution 2.89 · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 327 | — | D0EPS0 |
| B | — | protein | 328 | — | D0EPS0 |
| C | — | protein | 335 | — | D0EPS0 |
| D | — | protein | 325 | — | D0EPS0 |
| E | — | protein | 233 | — | — |
| G, I, K | — | protein | 232 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7K93 · DENV2 NS1 in complex with neutralizing 2B7 single chain Fab variable region (scfv) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D0EPS0
- Elsewhere: RCSB PDB 7K93 · PDBe 7K93 · UniProt D0EPS0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.