MolNFT v2 · #180089 · protein
Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with inhibitor 16
7EX7: “Crystal structure of Ebinur Lake virus cap snatching endonuclease in complex with inhibitor 16”. X-ray diffraction at 2.3, 3 ligands (1I6, MN, CL). MolNFT v2 #180089 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7EX7
- Type
- protein
- Length
- 701 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.3
- Source
- Abbey lake orthobunyavirus
- UniProt
- A0A059WLS9
- Ligands
- 1I6, MN, CL
Structure
x-ray diffraction · resolution 2.3 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 172 | — | A0A059WLS9 |
| C | — | protein | 177 | — | A0A059WLS9 |
| D | — | protein | 180 | — | A0A059WLS9 |
Ligands and binding sites
- 1I6 · Methyl (Z)-4-(4-(4-chlorobenzyl)-1-(3-methoxybenzyl) piperidin-4-yl)-2-hydroxy-4-oxobut-2-enoate · ligand · 4 copies · chains A, B, C, D
- MN · Manganese (II) ion · metal · 8 copies · chains A, B, C, D
- CL · Chloride ion · ion · chains C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EX7 · Crystal structure of ebinur lake virus cap snatching endonuclease in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A059WLS9
- Elsewhere: RCSB PDB 7EX7 · PDBe 7EX7 · UniProt A0A059WLS9
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