MolNFT v2 · #178881 · protein
Structure of wild type Bt4394, a GH20 family sulfoglycosidase, in complex with 6S-GlcNAc
7DVA: “Structure of wild type Bt4394, a GH20 family sulfoglycosidase, in complex with 6S-GlcNAc”. X-ray diffraction at 1.55, 1 ligand (NGS). MolNFT v2 #178881 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7DVA
- Type
- protein
- Length
- 1,045 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.55
- Source
- Bacteroides thetaiotaomicron
- UniProt
- A0A0P0FIE8
- Ligands
- NGS
Structure
x-ray diffraction · resolution 1.55 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 522 | — | A0A0P0FIE8 |
| A | — | protein | 523 | — | A0A0P0FIE8 |
Ligands and binding sites
- NGS · 2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose · sugar · 2 copies · chains B, A
- GOL · Glycerol · additive · 5 copies · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7DVA · A complex of a new GH20 enzyme from bacteroides thetaiotaomicron · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0P0FIE8
- Elsewhere: RCSB PDB 7DVA · PDBe 7DVA · UniProt A0A0P0FIE8
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