MolNFT v2 · #177890 · protein

S protein of SARS-CoV-2 in complex bound with P5A-1B8_3B

7CZS: “S protein of SARS-CoV-2 in complex bound with P5A-1B8_3B”. Electron microscopy at 3.6, 1 ligand (NAG). MolNFT v2 #177890 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7CZS
Type: protein
Length: 4,310 residues
Chains: 9
Method: electron microscopy
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 3.6
Source: Homo sapiens; Severe acute respiratory syndrome coronavirus 2
UniProt: P0DTC2, A0A5C2GG81, Q6GMX6, A0A5C2GCZ2, Q8TCD0
Ligands: NAG

Structure

electron microscopy · resolution 3.6 · 5 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	1006	—	P0DTC2
B	—	protein	1007	—	P0DTC2
C	—	protein	1004	—	P0DTC2
H, I, J	—	protein	217	—	A0A5C2GG81, Q6GMX6
K, M, N	—	protein	214	—	A0A5C2GCZ2, Q8TCD0

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 71 copies · chains A, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7CZS · S protein of SARS-cov-2 in complex bound with P5A-1B8_3B · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0DTC2
Every structure of UniProt A0A5C2GG81
Every structure of UniProt Q6GMX6
Every structure of UniProt A0A5C2GCZ2
Every structure of UniProt Q8TCD0
Elsewhere: RCSB PDB 7CZS · PDBe 7CZS · UniProt P0DTC2 · UniProt A0A5C2GG81 · UniProt Q6GMX6 · UniProt A0A5C2GCZ2 · UniProt Q8TCD0

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.