MolNFT v2 · #175623 · protein

Crystal structure of SPRY domain of TRIM9

7B2S · E3 ubiquitin-protein ligase TRIM9: “Crystal structure of SPRY domain of TRIM9”. X-ray diffraction at 1.5, 1 ligand (SO4). MolNFT v2 #175623 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7B2S
Type: protein
Length: 172 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.5
Source: Homo sapiens
Molecule: E3 ubiquitin-protein ligase TRIM9
EC: 2.3.2.27
UniProt: Q9C026
Ligands: SO4

Structure

x-ray diffraction · resolution 1.5 · 1 distinct chain · 2% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	E3 ubiquitin-protein ligase TRIM9 (EC 2.3.2.27)	protein	172	2% helix, 46% strand	Q9C026

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7B2S · Crystal structure of spry domain of TRIM9 · the same entry in another collection · chain A against A, TM-score 1.00
Q9C026 · AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase TRIM9 (Q9C026) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9C026
Elsewhere: RCSB PDB 7B2S · PDBe 7B2S · UniProt Q9C026

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