MolNFT v2 · #172565 · protein
Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11g
6YKV: “Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound 11g”. X-ray diffraction at 2.43, 2 ligands (ZN, MG). MolNFT v2 #172565 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YKV
- Type
- protein
- Length
- 845 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.43
- Source
- Neisseria gonorrhoeae
- UniProt
- A0A5K1KQ39
- Ligands
- ZN, MG
Structure
x-ray diffraction · resolution 2.43 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 845 | — | A0A5K1KQ39 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
- MG · Magnesium ion · metal · chains A
- EDO · 1,2-ethanediol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YKV · Neisseria gonorrhoeae leucyl-tRNA synthetase in complex with compound 11G · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A5K1KQ39
- Elsewhere: RCSB PDB 6YKV · PDBe 6YKV · UniProt A0A5K1KQ39
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