MolNFT v2 · #172167 · protein
Crystal structure of putative ancestral haloalkane dehalogenase AncHLD2 (node 2)
6Y9E: “Crystal structure of putative ancestral haloalkane dehalogenase AncHLD2 (node 2)”. X-ray diffraction at 1.7, 1 ligand (CL). MolNFT v2 #172167 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Y9E
- Type
- protein
- Length
- 1,741 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.7
- Source
- synthetic construct
- Ligands
- CL
Structure
x-ray diffraction · resolution 1.7 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 291 | — | — |
| D | — | protein | 291 | — | — |
| E | — | protein | 287 | — | — |
| F | — | protein | 290 | — | — |
Ligands and binding sites
- CL · Chloride ion · ion · 12 copies · chains A, B, C, D, E, F
- EDO · 1,2-ethanediol · additive · 30 copies · chains A, B, C, D, E, F
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 5 copies · chains A, B, C, D
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · 5 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Y9E · Crystal structure of putative ancestral haloalkane dehalogenase ANCHLD2 (node 2) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6Y9E · PDBe 6Y9E
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.