MolNFT v2 · #171740 · protein
Crystal structure of the c-Src SH3 domain H122R-Q128E mutant in complex with Cu(II) at pH 6.5 co-crystallized with methyl beta-cyclodextrin
6XX3: “Crystal structure of the c-Src SH3 domain H122R-Q128E mutant in complex with Cu(II) at pH 6.5 co-crystallized…”. X-ray diffraction at 1.36, 6 ligands (GLC, ZB2, ZB1). MolNFT v2 #171740 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6XX3
- Type
- protein
- Length
- 54 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.36
- Source
- Gallus gallus
- UniProt
- P00523
- Ligands
- GLC, ZB2, ZB1, ZB3, ZB0, CU
Structure
x-ray diffraction · resolution 1.36 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 54 | — | P00523 |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 2 copies · chains A
- ZB2 · 2-O-methyl-alpha-D-glucopyranose · sugar · 2 copies
- ZB1 · 3-O-methyl-alpha-D-glucopyranose · sugar
- ZB3 · 2,6-di-O-methyl-alpha-D-glucopyranose · sugar
- ZB0 · 2,3-di-O-methyl-alpha-D-glucopyranose · sugar
- CU · Copper (II) ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XX3 · Crystal structure of the C-src SH3 domain H122R-Q128E mutant in complex with CU(II) at pH… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00523
- Elsewhere: RCSB PDB 6XX3 · PDBe 6XX3 · UniProt P00523
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