MolNFT v2 · #170921 · DNA
Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J6 immobile Holliday junction
6X8B: “Self-assembly of a 3D DNA crystal lattice (4x5 duplex version) containing the J6 immobile Holliday junction”. X-ray diffraction at 2.899, 2 ligands (MG, CAC). MolNFT v2 #170921 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6X8B
- Type
- DNA
- Length
- 42 nucleotides
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.899
- Ligands
- MG, CAC
Structure
x-ray diffraction · resolution 2.899 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | dna | 21 | — | — |
| B | — | dna | 5 | — | — |
| C | — | dna | 9 | — | — |
| D | — | dna | 7 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6X8B · Self-assembly of a 3D DNA crystal lattice (4X5 duplex version) containing the J6 immobile… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6X8B · PDBe 6X8B
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