MolNFT v2 · #168184 · protein
Structure of Hepatitis C Virus Envelope Glycoprotein E2mc3-v1 redesigned core from genotype 1a bound to broadly neutralizing antibody AR3C
6UYD: “Structure of Hepatitis C Virus Envelope Glycoprotein E2mc3-v1 redesigned core from genotype 1a bound to…”. X-ray diffraction at 1.897, 1 ligand (NAG). MolNFT v2 #168184 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UYD
- Type
- protein
- Length
- 1,168 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.897
- Source
- Hepatitis C virus (isolate H); Homo sapiens
- Ligands
- NAG
Structure
x-ray diffraction · resolution 1.897 · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| E | — | protein | 143 | — | — |
| H | — | protein | 222 | — | — |
| L | — | protein | 211 | — | — |
| A | — | protein | 222 | — | — |
| B | — | protein | 212 | — | — |
| F | — | protein | 158 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 8 copies · chains E, F, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UYD · Structure of hepatitis C virus envelope glycoprotein E2MC3-V1 redesigned core from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6UYD · PDBe 6UYD
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