GL1X · GenesisL1 explorer

MolNFT v2 · #166260 · protein

Crystal structure of the disulfide engineered HLA-A0201 molecule in complex with one GL dipeptide in the A pocket.

6TDP: “Crystal structure of the disulfide engineered HLA-A0201 molecule in complex with one GL dipeptide in the A…”. X-ray diffraction at 1.4, 1 ligand (NA). MolNFT v2 #166260 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6TDP
Type
protein
Length
375 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.4
Source
Homo sapiens
UniProt
F6IQS1, P61769
Ligands
NA

Structure

x-ray diffraction · resolution 1.4 · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein276—F6IQS1
B—protein99—P61769

Ligands and binding sites

  • NA · Sodium ion · metal · chains A
  • GOL · Glycerol · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6TDP · Crystal structure of the disulfide engineered HLA-A0201 molecule in complex with one gl… · the same entry in another collection · chain A against A, TM-score 1.00
  • P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain B against A, TM-score 0.98

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