GL1X · GenesisL1 explorer

MolNFT v2 · #162601 · protein + RNA

Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide

6QDW: “Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptide”. Electron microscopy at 2.83. MolNFT v2 #162601 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6QDW
Type
protein + RNA
Length
6,208 residues
Chains
32
Method
electron microscopy
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.83
Source
Bos taurus; Escherichia coli (strain B / BL21-DE3); Escherichia coli BL21(DE3)
UniProt
A0A140N3L9, A0A140N7F5, A0A140N7G4, A0A140NAZ2, A0A140N5Z7, A0A140NHV0, A0A140N9E3, A0A140N5M6, A0A140N7J1, A0A140N3G7, A0A140N5K8, A0A140N5A3, A0A140N2T1, A0A140NDV1, A0A140N598, A0A140N3H4, A0A140N711, A0A140N6Z2, A0A140N4M0, A0A140N4L0, A0A140N6T7, A0A140NBS1, A0A140N5D7, A0A140N2S3, C6EGE8, A0A140N5L7, A0A140N846, A0A140N340, P02526

Structure

electron microscopy · resolution 2.83 · 32 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
0—protein77—A0A140N3L9
1—protein61—A0A140N7F5
2—protein57—A0A140N7G4
3—protein55—A0A140NAZ2
4—protein50—A0A140N5Z7
6—protein46—A0A140NHV0
7—protein64—A0A140N9E3
8—protein38—A0A140N5M6
a—rna118——
b—rna2888——
c—protein271—A0A140N7J1
d—protein209—A0A140N3G7
e—protein201—A0A140N5K8
f—protein177—A0A140N5A3
g—protein176—A0A140N2T1
h—protein39—A0A140NDV1
j—protein142—A0A140N598
k—protein122—A0A140N3H4
l—protein143—A0A140N711
m—protein136—A0A140N6Z2
n—protein120—A0A140N4M0
o—protein116—A0A140N4L0
p—protein113—A0A140N6T7
q—protein117—A0A140NBS1
r—protein99—A0A140N5D7
s—protein109—A0A140N2S3
t—protein93—C6EGE8
u—protein102—A0A140N5L7
v—rna75——
w—protein94—A0A140N846
y—protein74—A0A140N340
z—protein26—P02526

Compared structures

  • 6QDW · Cryo-EM structure of the 50S ribosomal subunit at 2.83 ångströms with modeled gbc secm… · the same entry in another collection · chain 0 against 0, TM-score 1.00

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