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MolNFT v2 · #161518 · protein

The evolving story of AtzT, a periplasmic binding protein

6PI6: “The evolving story of AtzT, a periplasmic binding protein”. X-ray diffraction at 1.65, 1 ligand (OKM). MolNFT v2 #161518 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6PI6
Type
protein
Length
1,328 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.65
Source
Pseudomonas sp. (strain ADP)
UniProt
Q936X6
Ligands
OKM

Structure

x-ray diffraction · resolution 1.65 · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein333—Q936X6
C, D—protein331—Q936X6

Ligands and binding sites

  • OKM · 4-(ethylamino)-6-[(propan-2-yl)amino]-1,3,5-triazin-2-ol · ligand · 4 copies · chains A, B, C, D
  • DMS · Dimethyl sulfoxide · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6PI6 · The evolving story of atzt, a periplasmic binding protein · the same entry in another collection · chain A against A, TM-score 1.00

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