MolNFT v2 · #161151 · protein + RNA
Cryo-EM structure of LbCas12a-crRNA: AcrVA4 (2:2 complex)
6P7N: “Cryo-EM structure of LbCas12a-crRNA: AcrVA4 (2:2 complex)”. Electron microscopy at 4.9, 1 ligand (MG). MolNFT v2 #161151 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6P7N
- Type
- protein + RNA
- Length
- 2,402 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 4.9
- Source
- Lachnospiraceae bacterium ND2006; Moraxella bovoculi; SYNTHETIC CONSTRUCT
- UniProt
- A0A0U2APF4
- Ligands
- MG
Structure
electron microscopy · resolution 4.9 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C, G | — | protein | 106 | — | A0A0U2APF4 |
| A, E | — | protein | 1070 | — | — |
| B, F | — | rna | 25 | — | — |
Ligands and binding sites
- MG · Magnesium ion · metal · 4 copies · chains A, B, E, F
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6P7N · Cryo-EM structure of LBCAS12A-crrna: ACRVA4 (2:2 complex) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0U2APF4
- Elsewhere: RCSB PDB 6P7N · PDBe 6P7N · UniProt A0A0U2APF4
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