MolNFT v2 · #160425 · protein
Structure of VcINDY bound to Malate
6OL0: “Structure of VcINDY bound to Malate”. X-ray diffraction at 3.502, 2 ligands (LMR, NA). MolNFT v2 #160425 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6OL0
- Type
- protein
- Length
- 1,712 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.502
- Source
- Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
- UniProt
- Q9KNE0
- Ligands
- LMR, NA
Structure
x-ray diffraction · resolution 3.502 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| C, D, A, B | — | protein | 428 | — | Q9KNE0 |
Ligands and binding sites
- LMR · (2S)-2-hydroxybutanedioic acid · ligand · 4 copies · chains C, D, A, B
- NA · Sodium ion · metal · 6 copies · chains C, D, A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6OL0 · Structure of vcindy bound to malate · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KNE0
- Elsewhere: RCSB PDB 6OL0 · PDBe 6OL0 · UniProt Q9KNE0
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