MolNFT v2 · #159670 · protein
Crystal Structure of NDM-1 D199N with Compound 16
6NY7: “Crystal Structure of NDM-1 D199N with Compound 16”. X-ray diffraction at 1.4, 2 ligands (L8J, ZN). MolNFT v2 #159670 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NY7
- Type
- protein
- Length
- 229 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.4
- Source
- Klebsiella pneumoniae
- UniProt
- E9NWK5
- Ligands
- L8J, ZN
Structure
x-ray diffraction · resolution 1.4 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 229 | — | E9NWK5 |
Ligands and binding sites
- L8J · [(5,7-dibromo-2-oxo-1,2-dihydroquinolin-4-yl) methyl]phosphonic acid · ligand · chains A
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NY7 · Crystal structure of ndm-1 D199N with compound 16 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt E9NWK5
- Elsewhere: RCSB PDB 6NY7 · PDBe 6NY7 · UniProt E9NWK5
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