MolNFT v2 · #159466 · protein
Crystal Structure of Lysyl-tRNA Synthetase from Chlamydia trachomatis complexed with L-lysine and Cladosporin
6NS0: “Crystal Structure of Lysyl-tRNA Synthetase from Chlamydia trachomatis complexed with L-lysine and Cladosporin”. X-ray diffraction at 2.2, 3 ligands (KRS, NA, CL). MolNFT v2 #159466 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6NS0
- Type
- protein
- Length
- 1,036 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.2
- Source
- Chlamydia trachomatis serovar L2b (strain UCH-1/proctitis)
- UniProt
- B0BAN6
- Ligands
- KRS, NA, CL
Structure
x-ray diffraction · resolution 2.2 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 518 | — | B0BAN6 |
Ligands and binding sites
- KRS · cladosporin · ligand · 2 copies · chains A, B
- NA · Sodium ion · metal · 2 copies · chains A
- CL · Chloride ion · ion · chains B
- EDO · 1,2-ethanediol · additive · 34 copies · chains A, B
- PG4 · Tetraethylene glycol · additive · 2 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NS0 · Crystal structure of lysyl-tRNA synthetase from chlamydia trachomatis complexed with… · the same entry in another collection · chain A against A, TM-score 1.00
- B0BAN6 · AlphaFold monomer V2.0 prediction for lysine--tRNA ligase (B0BAN6) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0BAN6
- Elsewhere: RCSB PDB 6NS0 · PDBe 6NS0 · UniProt B0BAN6
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