MolNFT v2 · #15886 · protein

Structure of the MesJ PP-ATPase from Escherichia Coli

1NI5 · Putative cell cycle protein mesJ: “Structure of the MesJ PP-ATPase from Escherichia Coli”. X-ray diffraction at 2.65, 4 pockets (best druggability 0.81). MolNFT v2 #15886 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1NI5
Type: protein
Length: 433 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.65
Source: Escherichia coli
Molecule: Putative cell cycle protein mesJ
UniProt: P52097
Pockets: 4 · best druggability 0.81

Structure

x-ray diffraction · resolution 2.65 · 1 distinct chain · 40% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative cell cycle protein mesJ	protein	433	40% helix, 21% strand	P52097

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1032	0.81	0.82	79	empty
2	51	0.34	0.78	15	empty
3	68	0.32	0.75	15	empty
4	62	0.30	0.74	18	empty

Modifications

Observed in the structure: 5 modified (engineered).

Compared structures

1NI5 · Structure of the mesj pp-ATPase from escherichia COLI · the same entry in another collection · chain A against A, TM-score 1.00
P52097 · AlphaFold monomer V2.0 prediction for TRNA(ILE)-lysidine synthase (P52097) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P52097
Elsewhere: RCSB PDB 1NI5 · PDBe 1NI5 · UniProt P52097

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