MolNFT v2 · #158843 · protein
Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus - free
6N9I: “Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus - free”. X-ray diffraction at 1.6, 3 ligands (CO, FE, SO4). MolNFT v2 #158843 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6N9I
- Type
- protein
- Length
- 828 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.6
- Source
- Parageobacillus caldoxylosilyticus NBRC 107762
- UniProt
- A0A023DFE8
- Ligands
- CO, FE, SO4
Structure
x-ray diffraction · resolution 1.6 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 276 | — | A0A023DFE8 |
Ligands and binding sites
- CO · Cobalt (II) ion · metal · 3 copies · chains A, B, C
- FE · Fe (III) ion · metal · 3 copies · chains A, B, C
- SO4 · Sulfate ion · ion · 11 copies · chains A, B, C
- EDO · 1,2-ethanediol · additive · 19 copies · chains A, B, C
- ACT · Acetate ion · additive · 6 copies · chains A, B, C
- PGE · Triethylene glycol · additive · 4 copies · chains A, B, C
- GOL · Glycerol · additive · 2 copies · chains B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6N9I · Structure of the quorum quenching lactonase from parageobacillus caldoxylosilyticus - free · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A023DFE8
- Elsewhere: RCSB PDB 6N9I · PDBe 6N9I · UniProt A0A023DFE8
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.