MolNFT v2 · #158618 · protein
Bacillus PS3 ATP synthase class 3
6N30: “Bacillus PS3 ATP synthase class 3”. Electron microscopy at 3.2, 4 ligands (ATP, ADP, MG). MolNFT v2 #158618 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6N30
- Type
- protein
- Length
- 4,711 residues
- Chains
- 22
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.2
- Source
- Bacillus sp. (strain PS3); Bacillus sp. PS3
- UniProt
- P00845, A0A0M3VGF9, A0A0M4U1P9, A0A0M4TPJ7, A0A0M5MQR7
- Ligands
- ATP, ADP, MG, PO4
Structure
electron microscopy · resolution 3.2 · 13 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| b2 | — | protein | 151 | — | — |
| b1 | — | protein | 157 | — | — |
| a | — | protein | 203 | — | — |
| c3, c4, c5, c6, c7, c8, c9, c0, c1, c2 | — | protein | 71 | — | P00845 |
| C | — | protein | 494 | — | A0A0M3VGF9 |
| A | — | protein | 500 | — | A0A0M3VGF9 |
| B | — | protein | 499 | — | A0A0M3VGF9 |
| F | — | protein | 470 | — | A0A0M4U1P9 |
| D | — | protein | 469 | — | A0A0M4U1P9 |
| E | — | protein | 471 | — | A0A0M4U1P9 |
| G | — | protein | 284 | — | A0A0M4TPJ7 |
| H | — | protein | 128 | — | A0A0M5MQR7 |
| I | — | protein | 175 | — | — |
Ligands and binding sites
- ATP · Adenosine-5'-triphosphate · ligand · 3 copies · chains C, F, A, B, E
- ADP · Adenosine-5'-diphosphate · ligand · chains A, E
- MG · Magnesium ion · metal · 4 copies · chains C, A, B, E
- PO4 · Phosphate ion · ion · chains D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- P00845 · AlphaFold monomer V2.0 prediction for ATP synthase subunit C (P00845) · a predicted model of the same protein · chain c0 against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00845
- Every structure of UniProt A0A0M3VGF9
- Every structure of UniProt A0A0M4U1P9
- Every structure of UniProt A0A0M4TPJ7
- Every structure of UniProt A0A0M5MQR7
- Elsewhere: RCSB PDB 6N30 · PDBe 6N30 · UniProt P00845 · UniProt A0A0M3VGF9 · UniProt A0A0M4U1P9 · UniProt A0A0M4TPJ7 · UniProt A0A0M5MQR7
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