MolNFT v2 · #158119 · protein

Crystal structure of KPC-2 with compound 6

6MNP: “Crystal structure of KPC-2 with compound 6”. X-ray diffraction at 2.202, 1 ligand (1CE). MolNFT v2 #158119 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6MNP
Type: protein
Length: 266 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.202
Source: Klebsiella pneumoniae
UniProt: Q9F663
Ligands: 1CE

Structure

x-ray diffraction · resolution 2.202 · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	266	—	Q9F663

Ligands and binding sites

1CE · 3-(1H-tetrazol-5-ylmethyl)-5,6,7,8-tetrahydro[1]benzothieno[2,3-d]pyrimidin-4(3H)-one · ligand · 3 copies · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6MNP · Crystal structure of kpc-2 with compound 6 · the same entry in another collection · chain A against A, TM-score 1.00
Q9F663 · AlphaFold monomer V2.0 prediction for carbapenem-hydrolyzing beta- lactamase kpc (Q9F663) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9F663
Elsewhere: RCSB PDB 6MNP · PDBe 6MNP · UniProt Q9F663

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.