MolNFT v2 · #157824 · protein
Crystal structure of budding yeast Cdc5 polo-box domain in complex with Spc72 phosphopeptide.
6MF5: “Crystal structure of budding yeast Cdc5 polo-box domain in complex with Spc72 phosphopeptide.”. X-ray diffraction at 2.7, 1 ligand (CL). MolNFT v2 #157824 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6MF5
- Type
- protein
- Length
- 526 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.7
- Source
- Saccharomyces cerevisiae
- UniProt
- P32562
- Ligands
- CL
Structure
x-ray diffraction · resolution 2.7 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 250 | — | P32562 |
| B | — | protein | 262 | — | P32562 |
| C, D | — | protein | 7 | — | — |
Ligands and binding sites
- CL · Chloride ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6MF5 · Crystal structure of budding yeast CDC5 polo-box domain in complex with SPC72… · the same entry in another collection · chain A against A, TM-score 1.00
- P32562 · AlphaFold monomer V2.0 prediction for cell cycle SERINE/THREONINE- protein kinase… · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P32562
- Elsewhere: RCSB PDB 6MF5 · PDBe 6MF5 · UniProt P32562
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