GL1X · GenesisL1 explorer

MolNFT v2 · #157785 · protein

Crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from Legionella pneumophila Philadelphia 1

6MDY: “Crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from Legionella pneumophila Philadelphia 1”. X-ray diffraction at 2.55. MolNFT v2 #157785 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6MDY
Type
protein
Length
978 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.55
Source
Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /…
UniProt
Q5ZWA3

Structure

x-ray diffraction · resolution 2.55 · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein242—Q5ZWA3
B—protein242—Q5ZWA3
C—protein239—Q5ZWA3
D—protein255—Q5ZWA3

Compared structures

  • 6MDY · Crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from legionella… · the same entry in another collection · chain D against D, TM-score 1.00
  • Q5ZWA3 · AlphaFold monomer V2.0 prediction for 2-dehydro-3-deoxyphosphooctonate aldolase (Q5ZWA3) · a predicted model of the same protein · chain C against A, TM-score 0.98

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