MolNFT v2 · #157527 · protein
The coordinates of the apo hexameric terminase complex
6M5S: “The coordinates of the apo hexameric terminase complex”. Electron microscopy at 3.9, 1 ligand (ZN). MolNFT v2 #157527 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6M5S
- Type
- protein
- Length
- 1,440 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.9
- Source
- Human alphaherpesvirus 1 strain 17
- UniProt
- P04295, P10212, B9VQG1
- Ligands
- ZN
Structure
electron microscopy · resolution 3.9 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 646 | — | P04295 |
| B | — | protein | 689 | — | P10212 |
| C | — | protein | 105 | — | B9VQG1 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6M5S · The coordinates of the apo hexameric terminase complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04295
- Every structure of UniProt P10212
- Every structure of UniProt B9VQG1
- Elsewhere: RCSB PDB 6M5S · PDBe 6M5S · UniProt P04295 · UniProt P10212 · UniProt B9VQG1
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