MolNFT v2 · #156795 · protein
Localized reconstruction of coxsackievirus A16 mature virion in complex with Fab 18A7
6LHT: “Localized reconstruction of coxsackievirus A16 mature virion in complex with Fab 18A7”. Electron microscopy at 3.67, 1 ligand (SPH). MolNFT v2 #156795 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6LHT
- Type
- protein
- Length
- 1,329 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.67
- Source
- Coxsackievirus A16; Mus musculus
- UniProt
- A0A2S1BJ89
- Ligands
- SPH
Structure
electron microscopy · resolution 3.67 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| L | — | protein | 113 | — | — |
| H | — | protein | 120 | — | — |
| A, C | — | protein | 218 | — | A0A2S1BJ89 |
| D, E, B | — | protein | 220 | — | A0A2S1BJ89 |
Ligands and binding sites
- SPH · Sphingosine · ligand · 5 copies · chains A, C, D, E, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6LHT · Localized reconstruction of coxsackievirus A16 mature virion in complex with Fab 18A7 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2S1BJ89
- Elsewhere: RCSB PDB 6LHT · PDBe 6LHT · UniProt A0A2S1BJ89
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