MolNFT v2 · #156562 · protein
Cryo-EM structure of echovirus 11 complexed with its attaching receptor CD55 at pH 5.5
6LAO: “Cryo-EM structure of echovirus 11 complexed with its attaching receptor CD55 at pH 5.5”. Electron microscopy at 2.64, 1 ligand (SPH). MolNFT v2 #156562 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6LAO
- Type
- protein
- Length
- 833 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.64
- Source
- Echovirus E11
- Ligands
- SPH
Structure
electron microscopy · resolution 2.64 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 285 | — | — |
| B | — | protein | 251 | — | — |
| C | — | protein | 238 | — | — |
| D | — | protein | 59 | — | — |
Ligands and binding sites
- SPH · Sphingosine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6LAO · Cryo-EM structure of echovirus 11 complexed with its attaching receptor CD55 at pH 5.5 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6LAO · PDBe 6LAO
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