MolNFT v2 · #156420 · protein
Sirtuin 2 protein with H3K18 myristoylated peptide and intact NAD molecule
6L66: “Sirtuin 2 protein with H3K18 myristoylated peptide and intact NAD molecule”. X-ray diffraction at 2.169, 3 ligands (NAD, 3LX, ZN). MolNFT v2 #156420 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6L66
- Type
- protein
- Length
- 304 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.169
- Source
- Homo sapiens; SYNTHETIC CONSTRUCT
- UniProt
- Q8IXJ6
- Ligands
- NAD, 3LX, ZN
Structure
x-ray diffraction · resolution 2.169 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 298 | — | Q8IXJ6 |
| C | — | protein | 6 | — | — |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · chains A
- 3LX · tridecanethial · ligand · chains A, C
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6L66 · Sirtuin 2 protein with H3K18 myristoylated peptide and intact NAD molecule · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8IXJ6
- Elsewhere: RCSB PDB 6L66 · PDBe 6L66 · UniProt Q8IXJ6
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