GL1X · GenesisL1 explorer

MolNFT v2 · #156269 · protein

Crystal Structure of P450BM3 with N-enanthoyl-L-prolyl-L-phenylalanine

6L1A: “Crystal Structure of P450BM3 with N-enanthoyl-L-prolyl-L-phenylalanine”. X-ray diffraction at 1.84, 2 ligands (HEM, OPF). MolNFT v2 #156269 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6L1A
Type
protein
Length
908 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.84
Source
Bacillus megaterium
UniProt
P14779
Ligands
HEM, OPF

Structure

x-ray diffraction · resolution 1.84 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein454—P14779

Ligands and binding sites

  • HEM · Protoporphyrin IX containing Fe · ligand · 2 copies · chains A, B
  • OPF · (2S)-2-[[(2S)-1-heptanoylpyrrolidin-2-yl]carbonylamino]-3-phenyl-propanoic acid · ligand · 2 copies · chains A, B
  • GOL · Glycerol · additive · 4 copies · chains A, B
  • DMS · Dimethyl sulfoxide · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6L1A · Crystal structure of P450BM3 with N-enanthoyl-L-prolyl-L-phenylalanine · the same entry in another collection · chain A against A, TM-score 1.00
  • P14779 · AlphaFold monomer V2.0 prediction for bifunctional cytochrome P450/NADPH--P450 reductase… · a predicted model of the same protein · chain A against A, TM-score 0.99

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