GL1X · GenesisL1 explorer

MolNFT v2 · #155716 · protein

lovastatin esterase PcEST inactive mutant S57A in complex with lovastatin

6KJD: “lovastatin esterase PcEST inactive mutant S57A in complex with lovastatin”. X-ray diffraction at 2.299, 1 ligand (LVA). MolNFT v2 #155716 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6KJD
Type
protein
Length
800 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.299
Source
Penicillium rubens Wisconsin 54-1255
UniProt
B6H6L7
Ligands
LVA

Structure

x-ray diffraction · resolution 2.299 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
B, A—protein400—B6H6L7

Ligands and binding sites

  • LVA · (3R,5R)-7-((1r,2r,6s,8r,8as)-2,6-dimethyl-8-{[(2R)-2-methylbutanoyl]oxy}-1,2,6,7,8,8A-hexahydronaphthalen-1-yl)-3,5-dihydroxyheptanoic acid · ligand · 2 copies · chains B, A
  • 144 · Tris-hydroxymethyl-methyl-ammonium · additive · 5 copies · chains B, A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6KJD · Lovastatin esterase pcest inactive mutant S57A in complex with lovastatin · the same entry in another collection · chain A against A, TM-score 1.00
  • B6H6L7 · AlphaFold monomer V2.0 prediction for lovastatin esterase (B6H6L7) · a predicted model of the same protein · chain B against A, TM-score 1.00

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