MolNFT v2 · #155562 · protein
Crystal structure of BRD4 bromodomain 1 (BD1) in complex with 6-hydroxy-16-methoxy-11-methyl-2-oxa-11-azatetracyclo[8.6.1.03,8.013,17]heptadeca-1(16),3,5,7,9,13(17),14-heptaen-12-one
6KEK: “Crystal structure of BRD4 bromodomain 1 (BD1) in complex with…”. X-ray diffraction at 1.553, 1 ligand (D7L). MolNFT v2 #155562 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6KEK
- Type
- protein
- Length
- 123 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.553
- Source
- Homo sapiens
- UniProt
- O60885
- Ligands
- D7L
Structure
x-ray diffraction · resolution 1.553 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 123 | — | O60885 |
Ligands and binding sites
- D7L · 6-hydroxy-16-methoxy-11-methyl-2-oxa-11-azatetracyclo[8.6.1.03,8.013,17]heptadeca-1(16),3,5,7, 9,13(17),14-heptaen-12-one · ligand · chains A
- FMT · Formic acid · additive · 7 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6KEK · Crystal structure of BRD4 bromodomain 1 (BD1) in complex with 6… · the same entry in another collection · chain A against A, TM-score 1.00
- O60885 · AlphaFold monomer V2.0 prediction for bromodomain-containing protein 4 (O60885) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O60885
- Elsewhere: RCSB PDB 6KEK · PDBe 6KEK · UniProt O60885
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