MolNFT v2 · #155291 · protein

Structure of CSY4 Apo-form

6K5V: “Structure of CSY4 Apo-form”. X-ray diffraction at 2.69, 1 ligand (CL). MolNFT v2 #155291 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6K5V
Type: protein
Length: 2,588 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.69
Source: Arabidopsis thaliana
UniProt: P20115
Ligands: CL

Structure

x-ray diffraction · resolution 2.69 · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	—	protein	433	—	P20115
B, D, E	—	protein	430	—	P20115
F	—	protein	432	—	P20115

Ligands and binding sites

CL · Chloride ion · ion · 6 copies · chains A, B, C, D, E, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6K5V · Structure of CSY4 apo-form · the same entry in another collection · chain F against F, TM-score 1.00
P20115 · AlphaFold monomer V2.0 prediction for citrate synthase 4, mitochondrial (P20115) · a predicted model of the same protein · chain D against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P20115
Elsewhere: RCSB PDB 6K5V · PDBe 6K5V · UniProt P20115

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