MolNFT v2 · #154417 · protein
Crystal structure of GH10 family xylanase XynAF1 from Aspergillus fumigatus Z5
6JDT: “Crystal structure of GH10 family xylanase XynAF1 from Aspergillus fumigatus Z5”. X-ray diffraction at 1.68, 1 ligand (NAG). MolNFT v2 #154417 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JDT
- Type
- protein
- Length
- 638 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.68
- Source
- Aspergillus fumigatus Z5
- UniProt
- A0A0J5Q413
- Ligands
- NAG
Structure
x-ray diffraction · resolution 1.68 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 319 | — | A0A0J5Q413 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A, B
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JDT · Crystal structure of GH10 family xylanase XYNAF1 from aspergillus fumigatus Z5 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0J5Q413
- Elsewhere: RCSB PDB 6JDT · PDBe 6JDT · UniProt A0A0J5Q413
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