MolNFT v2 · #153912 · protein
Crystal structure of isocitrate dehydrogenase from Ostreococcus tauri in complex with NAD+ and Mg2+
6IXT: “Crystal structure of isocitrate dehydrogenase from Ostreococcus tauri in complex with NAD+ and Mg2+”. X-ray diffraction at 1.78, 3 ligands (NAD, MG, SO4). MolNFT v2 #153912 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6IXT
- Type
- protein
- Length
- 1,620 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.78
- Source
- Ostreococcus tauri
- UniProt
- A0A1Y5IEA9
- Ligands
- NAD, MG, SO4
Structure
x-ray diffraction · resolution 1.78 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 405 | — | A0A1Y5IEA9 |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 2 copies · chains A, C
- MG · Magnesium ion · metal · chains A, B
- SO4 · Sulfate ion · ion · 8 copies · chains A, B, C, D
- GOL · Glycerol · additive · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6IXT · Crystal structure of isocitrate dehydrogenase from ostreococcus tauri in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1Y5IEA9
- Elsewhere: RCSB PDB 6IXT · PDBe 6IXT · UniProt A0A1Y5IEA9
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