MolNFT v2 · #153703 · protein
Crystal Structure of Cell Surface Glyceraldehyde-3-Phosphate Dehydrogenase Complexed with Hg2+ from Lactobacillus plantarum
6IQV: “Crystal Structure of Cell Surface Glyceraldehyde-3-Phosphate Dehydrogenase Complexed with Hg2+ from…”. X-ray diffraction at 2.13, 1 ligand (HG). MolNFT v2 #153703 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6IQV
- Type
- protein
- Length
- 1,335 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.13
- Source
- Lactobacillus plantarum subsp. plantarum JCM 1149
- UniProt
- D7VA33
- Ligands
- HG
Structure
x-ray diffraction · resolution 2.13 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 340 | — | D7VA33 |
| B | — | protein | 336 | — | D7VA33 |
| C | — | protein | 326 | — | D7VA33 |
| D | — | protein | 333 | — | D7VA33 |
Ligands and binding sites
- HG · Mercury (II) ion · metal · 11 copies · chains A, B, C, D
- EDO · 1,2-ethanediol · additive · 6 copies · chains A, D, B, C
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6IQV · Crystal structure of cell surface glyceraldehyde-3-phosphate dehydrogenase complexed with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D7VA33
- Elsewhere: RCSB PDB 6IQV · PDBe 6IQV · UniProt D7VA33
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