MolNFT v2 · #153359 · protein
Crystal structure of M1 zinc metallopeptidase E323A mutant bound to Tyr-ser-ala substrate from Deinococcus radiodurans
6IFG: “Crystal structure of M1 zinc metallopeptidase E323A mutant bound to Tyr-ser-ala substrate from Deinococcus…”. X-ray diffraction at 1.9, 1 ligand (ZN). MolNFT v2 #153359 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6IFG
- Type
- protein
- Length
- 868 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.9
- Source
- Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 /…
- UniProt
- Q9RVZ5
- Ligands
- ZN
Structure
x-ray diffraction · resolution 1.9 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 430 | — | Q9RVZ5 |
| B | — | protein | 432 | — | Q9RVZ5 |
| E, F | — | protein | 3 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · 4 copies · chains A, E, B, F
- FMT · Formic acid · additive · 13 copies · chains A, E, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6IFG · Crystal structure of M1 zinc metallopeptidase E323A mutant bound to tyr-ser-ala substrate… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RVZ5
- Elsewhere: RCSB PDB 6IFG · PDBe 6IFG · UniProt Q9RVZ5
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