MolNFT v2 · #152410 · protein
The ligand-bound, open structure of CD0873, a substrate binding protein with adhesive properties from Clostridium difficile.
6HNJ: “The ligand-bound, open structure of CD0873, a substrate binding protein with adhesive properties from…”. X-ray diffraction at 1.8. MolNFT v2 #152410 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6HNJ
- Type
- protein
- Length
- 297 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.8
- Source
- Peptoclostridium difficile 630
- UniProt
- Q18A65
Structure
x-ray diffraction · resolution 1.8 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 297 | — | Q18A65 |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · 6 copies · chains A
- PGE · Triethylene glycol · additive · chains A
- PEG · Di(hydroxyethyl)ether · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6HNJ · The ligand-bound, open structure of CD0873, a substrate binding protein with adhesive… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q18A65
- Elsewhere: RCSB PDB 6HNJ · PDBe 6HNJ · UniProt Q18A65
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