MolNFT v2 · #152071 · protein
R49K variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 1.6 A.
6HDH: “R49K variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 1.6 A.”. X-ray diffraction at 1.62, 1 ligand (MG). MolNFT v2 #152071 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6HDH
- Type
- protein
- Length
- 436 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.62
- Source
- Lactococcus lactis subsp. lactis
- UniProt
- P71447
- Ligands
- MG
Structure
x-ray diffraction · resolution 1.62 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 218 | — | P71447 |
Ligands and binding sites
- MG · Magnesium ion · metal · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 7 copies · chains A, B
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6HDH · R49K variant of beta-phosphoglucomutase from lactococcus lactis in an open conformer to… · the same entry in another collection · chain A against A, TM-score 1.00
- P71447 · AlphaFold monomer V2.0 prediction for beta-phosphoglucomutase (P71447) · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P71447
- Elsewhere: RCSB PDB 6HDH · PDBe 6HDH · UniProt P71447
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